WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y110A7A.1a Sequence Name  Y110A7A.1a
Length (nt)  5175   Chromosome Location  I: 5165157-5165340
Chromosome . Primary Identifier  I Chromosome Location . Start  5165157
Chromosome Location . End  5165340
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y110A7A.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24117 HCP-6, isoform a 195.2 1724 Caenorhabditis elegans
 

Other

29 RNAi

WormBase ID
WBRNAi00073327
WBRNAi00073329
WBRNAi00073328
WBRNAi00099957
WBRNAi00055321
WBRNAi00036548
WBRNAi00100862
WBRNAi00101233
WBRNAi00101290
WBRNAi00116721
WBRNAi00099351
WBRNAi00099755
WBRNAi00101252
WBRNAi00101271
WBRNAi00099553
WBRNAi00101145
WBRNAi00000214
WBRNAi00022776
WBRNAi00100114
WBRNAi00080300
WBRNAi00100301
WBRNAi00100488
WBRNAi00100675
WBRNAi00101049
WBRNAi00101212
WBRNAi00080297
WBRNAi00116025
WBRNAi00116022
WBRNAi00112095

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y110A7A.1a 5165157 5165340 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001833 hcp-6 Y110A7A.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y110A7A.1a 5165157 5165340 1
CDS:Y110A7A.1a 5165390 5165634 1
CDS:Y110A7A.1a 5165685 5166143 1
CDS:Y110A7A.1a 5166201 5166374 1
CDS:Y110A7A.1a 5166423 5167456 1
CDS:Y110A7A.1a 5167502 5167595 1
CDS:Y110A7A.1a 5167647 5168124 1
CDS:Y110A7A.1a 5168167 5169239 1
CDS:Y110A7A.1a 5169291 5170242 1
CDS:Y110A7A.1a 5170573 5170659 1
CDS:Y110A7A.1a 5170761 5171099 1
CDS:Y110A7A.1a 5171149 5171204 1

1 Sequence

Length
5175

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y110A7A.1a.1 Y110A7A.1a.1 5285   I: 5165152-5171309