WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00087587 Genotype  itIs153[pie-1::GFP::PAR-2]
Phenotype Remark  Class I. Embryos in this class do not undergo ruffling, pseudocleavage or cytokinesis. Pronuclei form and migrate normally in these embryos, eventually resulting in the formation of a symmetric spindle. GFP:PAR-2 did not become visibly enriched on the cortex (n=3), and instead was maintained throughout the cytoplasm and also on foci around centrosomes. Class II and Class III. These embryos developed cytokinesis furrows that were either transient (Class II) or lead to the formation of two equal size cells (Class III). Unlike Class I embryos, however, Class II and Class III embryos developed one or two patches of GFP:PAR-2 at the cortex by pronuclear meeting (n=6). In all nmy-2(RNAi) embryos (n=8), GFP:PAR-2 was also detected in foci around the pronuclei or spindle. In four out of eight time-lapse analyses, GFP:PAR-2 appeared to shuttle from the cortex to the nearest pronucleus or centrosome. Remark  paper remark: Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003777 nmy-2 F20G4.3 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20G4.3 F20G4.3 6012   I: 7927071-7927198

1 Laboratories

Primary Identifier
JH

1 Phenotype

Identifier Name Description
WBPhenotype:0000961 pattern of transgene expression variant Any variation in the cellular or subcellular pattern of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005735

0 Strain