WormMine: RNAi WBRNAi00077228

• WormBase ID: WBRNAi00077228
• Genotype: ppgp-5::gfp
• Phenotype Remark: Although there was significantly reduced survival on P. aeruginosa strain PA14, compared to control animals, this tir-1 isoform did not significantly affect the induction of pgp-5 in response to infection. The pan-isoform tir-1 RNAi affected both expression and reduced survival.
• Remark: The ppgp-5::gfp reporter strain contains an integrated transgene, ppgp-5::gfp, in which the GFP-encoding gene is under the control of the 300 bp upstream sequence of the pgp-5 promoter.

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Data Sets

• WormBaseAcedbConverter

1 Inhibits Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00006575	tir-1	F13B10.1	Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:F13B10.1b	F13B10.1b	1761	III: 3870183-3870268

1 Laboratories

Primary Identifier
WE

1 Phenotype

Identifier	Name	Description
WBPhenotype:0001271	pathogen induced death increased	Animals are more prone to lethality as a result of infection compared to control.

1 Phenotype _ Not _ Observed

Identifier	Name	Description
WBPhenotype:0000962	level of transgene expression variant	Any variation in the measured expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

1 Reference

First Author	Title	Year	Journal	Volume	Pages	PubMed ID
						WBPaper00031023

0 Strain