WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00114499 Remark  In SJ4100 the GFP sequence is under the control of the promoter of the mitochondrial chaperone hsp-6 is a UPRmt reporter strain. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation (Y45F10D.13a.2).

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012891 sorb-1 Y45F10D.13 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45F10D.13a Y45F10D.13a 3018   IV: 13750336-13750374
CDS:Y45F10D.13d Y45F10D.13d 3024   IV: 13750336-13750374
CDS:Y45F10D.13c Y45F10D.13c 1422   IV: 13764610-13764715
CDS:Y45F10D.13e Y45F10D.13e 1428   IV: 13764610-13764715

0 Laboratories

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000962 level of transgene expression variant Any variation in the measured expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00057256

1 Strain

WormBase ID
WBStrain00034068