WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y45F10D.13a Sequence Name  Y45F10D.13a
Length (nt)  3018   Chromosome Location  IV: 13750336-13750374
Chromosome . Primary Identifier  IV Chromosome Location . Start  13750336
Chromosome Location . End  13750374
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F10D.13a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44448 SORB-1, isoform a 112.8 1005 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00048742
WBRNAi00056600
WBRNAi00109550
WBRNAi00109606
WBRNAi00032974
WBRNAi00037097
WBRNAi00077332
WBRNAi00109161
WBRNAi00109218
WBRNAi00114504
WBRNAi00114500
WBRNAi00114499
WBRNAi00114501
WBRNAi00109315
WBRNAi00109259
WBRNAi00114498
WBRNAi00114497
WBRNAi00109453
WBRNAi00109509
WBRNAi00109412
WBRNAi00109356

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y45F10D.13a 13750336 13750374 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012891 sorb-1 Y45F10D.13 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y45F10D.13a 13750336 13750374 1
CDS:Y45F10D.13a 13750423 13750627 1
CDS:Y45F10D.13a 13751043 13751173 1
CDS:Y45F10D.13a 13752481 13753334 1
CDS:Y45F10D.13a 13754128 13754228 1
CDS:Y45F10D.13a 13755691 13756035 1
CDS:Y45F10D.13a 13761780 13761917 1
CDS:Y45F10D.13a 13765817 13765943 1
CDS:Y45F10D.13a 13766579 13766737 1
CDS:Y45F10D.13a 13766993 13767197 1
CDS:Y45F10D.13a 13768865 13769175 1
CDS:Y45F10D.13a 13769294 13769527 1
CDS:Y45F10D.13a 13770183 13770351 1

1 Sequence

Length
3018

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y45F10D.13a.1 Y45F10D.13a.1 3164   IV: 13750334-13770495