WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00088748 Genotype  glp-4(bn2); rrf-3(pk1426)
Remark  obr-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012930 obr-1 Y47D3A.17 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D3A.17d Y47D3A.17d 1350   III: 11257505-11257647
CDS:Y47D3A.17c Y47D3A.17c 2529   III: 11257505-11257647
CDS:Y47D3A.17a Y47D3A.17a 2301   III: 11257505-11257647
CDS:Y47D3A.17b Y47D3A.17b 1884   III: 11257505-11257647
CDS:Y47D3A.17e Y47D3A.17e 2199   III: 11257505-11257647

1 Laboratories

Primary Identifier
HY

2 Phenotype

Identifier Name Description
WBPhenotype:0002059 pore forming toxin hypersensitive Animals respond to pore forming toxins at a lower concentration or a shorter exposure compared to control animals. Increased susceptibility to pore forming toxins (e.g. Cry5B from Bacillus thuringiensis) is often measured by a decrease in the rate of survival in the presence of pore forming toxins compared to controls.
WBPhenotype:0002057 Bacillus thuringiensis toxin hypersensitive Animals respond to Bacillus thuringiensis toxins (Bt toxins) at a lower concentration or a shorter exposure compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038231

0 Strain