WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47D3A.17d Sequence Name  Y47D3A.17d
Length (nt)  1350   Chromosome Location  III: 11257505-11257647
Chromosome . Primary Identifier  III Chromosome Location . Start  11257505
Chromosome Location . End  11257647
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D3A.17d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24330 OBR-1, isoform d 51.2 449 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00056739
WBRNAi00056738
WBRNAi00020699
WBRNAi00037156
WBRNAi00088641
WBRNAi00091935
WBRNAi00088748

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y47D3A.17d 11257505 11257647 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012930 obr-1 Y47D3A.17 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y47D3A.17d 11257505 11257647 -1
CDS:Y47D3A.17d 11258079 11258176 -1
CDS:Y47D3A.17d 11258228 11258350 -1
CDS:Y47D3A.17d 11258396 11258568 -1
CDS:Y47D3A.17d 11258913 11259230 -1
CDS:Y47D3A.17d 11259881 11260036 -1
CDS:Y47D3A.17d 11260133 11260243 -1
CDS:Y47D3A.17d 11260840 11261067 -1

1 Sequence

Length
1350

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47D3A.17d.1 Y47D3A.17d.1 1552   III: 11257303-11261067