WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00034940 Phenotype Remark  penetrance is less than 90%
Remark  bacterial-feeding RNAi began at the L1 larval stage Secondary Identifier  MV_SV:mv_R151.2

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020107 prps-1 R151.2 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R151.2a R151.2a 1134   III: 7212617-7212647
CDS:R151.2b R151.2b 960   III: 7212878-7212892
CDS:R151.2c R151.2c 957   III: 7213240-7213251
CDS:R151.2d R151.2d 1341   III: 7210108-7210201

2 Laboratories

Primary Identifier
MV
SV

2 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024497

0 Strain