WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R151.2a Sequence Name  R151.2a
Length (nt)  1134   Chromosome Location  III: 7212617-7212647
Chromosome . Primary Identifier  III Chromosome Location . Start  7212617
Chromosome Location . End  7212647
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R151.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48009 PRPS-1, isoform a 41.2 377 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00051974
WBRNAi00005213
WBRNAi00034940

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R151.2a 7212617 7212647 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020107 prps-1 R151.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:R151.2a 7212617 7212647 1
CDS:R151.2a 7212735 7212892 1
CDS:R151.2a 7213299 7213813 1
CDS:R151.2a 7214121 7214294 1
CDS:R151.2a 7214345 7214504 1
CDS:R151.2a 7214619 7214714 1

1 Sequence

Length
1134

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R151.2a.1 R151.2a.1 1797   III: 7212531-7215291