WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00084499 Phenotype Remark  dsh-2(RNAi),mig-5(RNAi) enhances the defect observed with src-1(RNAi) in that more embryos have left-right EMS daughters instead of typical anterior-posterior daughters.
Remark  Entire sequence of clone (yk46b11 and yk55h11) used for RNAi not known as only the ends of the sequence were determined. Exact sequence used for src-1 RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001102 dsh-2 C27A2.6 Caenorhabditis elegans
WBGene00003241 mig-5 T05C12.6 Caenorhabditis elegans
WBGene00005077 src-1 Y92H12A.1 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y92H12A.1b Y92H12A.1b 1614   I: 1567609-1567685
CDS:T05C12.6c T05C12.6c 1878   II: 8182509-8182639
CDS:C27A2.6 C27A2.6 2280   II: 5078429-5078567
CDS:T05C12.6a T05C12.6a 2019   II: 8182478-8182626
CDS:T05C12.6b T05C12.6b 2001   II: 8182509-8182639
CDS:Y92H12A.1a Y92H12A.1a 1602   I: 1567609-1567685
CDS:Y92H12A.1c Y92H12A.1c 1434   I: 1570440-1570681
CDS:Y92H12A.1d Y92H12A.1d 678   I: 1577400-1577868

1 Laboratories

Primary Identifier
WM

1 Phenotype

Identifier Name Description
WBPhenotype:0001235 cell division polarity variant Any variation in the orientation of the physical partitioning and separation of a cell into daughter cells compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005375

0 Strain