WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098812 Phenotype Remark  Defect in the anchoring of the nucleus to the cortex in E cells.
Remark  Exact sequence used for RNAi not stated but authors used cDNA clone yk216a12 (mig-5) and yk55h11 (dsh-2).
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001102 dsh-2 C27A2.6 Caenorhabditis elegans
WBGene00003241 mig-5 T05C12.6 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05C12.6c T05C12.6c 1878   II: 8182509-8182639
CDS:C27A2.6 C27A2.6 2280   II: 5078429-5078567
CDS:T05C12.6a T05C12.6a 2019   II: 8182478-8182626
CDS:T05C12.6b T05C12.6b 2001   II: 8182509-8182639

1 Laboratories

Primary Identifier
HS

1 Phenotype

Identifier Name Description
WBPhenotype:0001997 nuclear anchoring variant The nucleus or nuclei are not positioned in a similar manner or pattern in the cell or syncytium to that observed in controls.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036055

0 Strain