WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00072756 Phenotype Remark  RNAi phenotype in lin-35(n2239) worms was reproducibly stronger than those observed in WT (primary screen) and rrf-3(pk1426) (secondary screen) animals.
Remark  candidate lin-35 interacting gene based on results of the secondary screen
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000625 col-48 Y54E10BL.2 Caenorhabditis elegans
WBGene00003186 mek-2 Y54E10BL.6 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E10BL.6 Y54E10BL.6 1164   I: 3006029-3006203
CDS:Y54E10BL.2 Y54E10BL.2 858   I: 3010690-3011428

1 Laboratories

Primary Identifier
SV

2 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000038 exploded through vulva The animal is ruptured at the vulva and displays an extrusion of internal organs at the site of rupture.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029258

1 Strain

WormBase ID
WBStrain00000001