WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54E10BL.6 Sequence Name  Y54E10BL.6
Length (nt)  1164   Chromosome Location  I: 3006029-3006203
Chromosome . Primary Identifier  I Chromosome Location . Start  3006029
Chromosome Location . End  3006203
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10BL.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25437 MEK-2 42.8 387 Caenorhabditis elegans
 

Other

34 RNAi

WormBase ID
WBRNAi00113191
WBRNAi00066930
WBRNAi00067140
WBRNAi00072755
WBRNAi00072757
WBRNAi00075033
WBRNAi00075035
WBRNAi00075034
WBRNAi00075037
WBRNAi00075036
WBRNAi00075039
WBRNAi00075038
WBRNAi00085575
WBRNAi00000135
WBRNAi00057358
WBRNAi00004732
WBRNAi00081389
WBRNAi00080582
WBRNAi00075040
WBRNAi00091789
WBRNAi00091791
WBRNAi00091793
WBRNAi00091795
WBRNAi00072756
WBRNAi00087950
WBRNAi00101900
WBRNAi00101905
WBRNAi00085180
WBRNAi00097645
WBRNAi00087962

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54E10BL.6 3006029 3006203 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003186 mek-2 Y54E10BL.6 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54E10BL.6 3006029 3006203 -1
CDS:Y54E10BL.6 3007653 3007933 -1
CDS:Y54E10BL.6 3008734 3008858 -1
CDS:Y54E10BL.6 3008909 3009005 -1
CDS:Y54E10BL.6 3012844 3013062 -1
CDS:Y54E10BL.6 3013118 3013297 -1
CDS:Y54E10BL.6 3013359 3013445 -1

1 Sequence

Length
1164

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54E10BL.6.1 Y54E10BL.6.1 1793   I: 3005403-3013448