WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086349 Genotype  rrf-3(pk1426)
Phenotype Remark  Authors report that mec-8 and sym-1 RNAi combine to generate a synthetic (enhanced) lethal phenotype
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

4 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003172 mec-8 F46A9.6 Caenorhabditis elegans
WBGene00006366 sym-1 C44H4.3 Caenorhabditis elegans
WBGene00219951 F46A9.12 F46A9.12 Caenorhabditis elegans
WBGene00008094 C44H4.4 C44H4.4 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44H4.3 C44H4.3 2043   X: 14581799-14581876
CDS:C44H4.4 C44H4.4 2991   X: 14569092-14569298
CDS:F46A9.6 F46A9.6 939   I: 9441972-9442279

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028381

0 Strain