WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077782 Phenotype Remark  RNAi resulted in immediate arrest of larval growth and/or extensive death.
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Authors amplified by PCR from a C. elegans mixed stage cDNA library. Primer sequences are available from the author on request.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004458 rpn-1 T22D1.9 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22D1.9 T22D1.9 2946   IV: 6906636-6906724

0 Laboratories

2 Phenotype

Identifier Name Description
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028730

1 Strain

WormBase ID
WBStrain00000001