WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T22D1.9 Sequence Name  T22D1.9
Length (nt)  2946   Chromosome Location  IV: 6906636-6906724
Chromosome . Primary Identifier  IV Chromosome Location . Start  6906636
Chromosome Location . End  6906724
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22D1.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17253 RPN-1 107.4 981 Caenorhabditis elegans
 

Other

29 RNAi

WormBase ID
WBRNAi00095738
WBRNAi00085474
WBRNAi00108311
WBRNAi00026357
WBRNAi00077770
WBRNAi00009209
WBRNAi00053831
WBRNAi00076698
WBRNAi00077782
WBRNAi00022808
WBRNAi00080473
WBRNAi00112246
WBRNAi00112245
WBRNAi00064395
WBRNAi00095888
WBRNAi00095965
WBRNAi00096040
WBRNAi00096117
WBRNAi00096194
WBRNAi00096271
WBRNAi00096366
WBRNAi00096449
WBRNAi00096532
WBRNAi00096631
WBRNAi00078776
WBRNAi00078707
WBRNAi00078741
WBRNAi00090991
WBRNAi00112146

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T22D1.9 6906636 6906724 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004458 rpn-1 T22D1.9 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T22D1.9 6906636 6906724 -1
CDS:T22D1.9 6906774 6906915 -1
CDS:T22D1.9 6906961 6907071 -1
CDS:T22D1.9 6907118 6907957 -1
CDS:T22D1.9 6908033 6908972 -1
CDS:T22D1.9 6909020 6909744 -1
CDS:T22D1.9 6909806 6909904 -1

1 Sequence

Length
2946

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T22D1.9.1 T22D1.9.1 3171   IV: 6906420-6909913