WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00069882 Phenotype Remark  has prominent vacuolated structures
Remark  exact sequence used for RNAi not stated by authors, genomic sequence of gene used for curation

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004373 rme-1 W06H8.1 Caenorhabditis elegans

9 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.1a W06H8.1a 2361   V: 6210276-6210470
CDS:W06H8.1f W06H8.1f 1668   V: 6214859-6215009
CDS:W06H8.1i W06H8.1i 1683   V: 6214859-6215009
CDS:W06H8.1b W06H8.1b 2376   V: 6210276-6210470
CDS:W06H8.1c W06H8.1c 1770   V: 6208885-6208954
CDS:W06H8.1d W06H8.1d 1731   V: 6211922-6211937
CDS:W06H8.1e W06H8.1e 1842   V: 6209877-6210018
CDS:W06H8.1g W06H8.1g 1842   V: 6211026-6211152
CDS:W06H8.1h W06H8.1h 1827   V: 6211026-6211152

1 Laboratories

Primary Identifier
DH

1 Phenotype

Identifier Name Description
WBPhenotype:0001428 intestinal vacuole Vacuoles accumulate in the intestine.

2 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004718

0 Strain