WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W06H8.1f Sequence Name  W06H8.1f
Length (nt)  1668   Chromosome Location  V: 6214859-6215009
Chromosome . Primary Identifier  V Chromosome Location . Start  6214859
Chromosome Location . End  6215009
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06H8.1f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33335 RME-1, isoform f 62.6 555 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00054917
WBRNAi00080553
WBRNAi00069882
WBRNAi00102911
WBRNAi00102913
WBRNAi00102912
WBRNAi00102914
WBRNAi00069881
WBRNAi00069880
WBRNAi00065612

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W06H8.1f 6214859 6215009 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004373 rme-1 W06H8.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:W06H8.1f 6214859 6215009 1
CDS:W06H8.1f 6215067 6215406 1
CDS:W06H8.1f 6215556 6216235 1
CDS:W06H8.1f 6216285 6216418 1
CDS:W06H8.1f 6216789 6217050 1
CDS:W06H8.1f 6217159 6217259 1

1 Sequence

Length
1668

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W06H8.1f.2 W06H8.1f.2 2552   V: 6210685-6217643
Transcript:W06H8.1f.3 W06H8.1f.3 2148   V: 6214689-6217647
Transcript:W06H8.1f.4 W06H8.1f.4 2148   V: 6214713-6217664
Transcript:W06H8.1f.1 W06H8.1f.1 2088   V: 6214827-6217647