WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00107634 Genotype  xrn-2ts (xeSi57[Pxrn-2::xrn-2(codon-optimized/P107L)::GFP::his::flag::xrn-2 3'utr;unc-119(+)])
Phenotype Remark  Figure 2A, all embryos die (synthetic phenotype with paxt-1(RNAi) and xrn-2ts) Remark  (Figure 2A) paxt-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011034 paxt-1 R05D11.6 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05D11.6 R05D11.6 1008   I: 8596338-8596444

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00044759

0 Strain