WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R05D11.6 Sequence Name  R05D11.6
Length (nt)  1008   Chromosome Location  I: 8596338-8596444
Chromosome . Primary Identifier  I Chromosome Location . Start  8596338
Chromosome Location . End  8596444
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05D11.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32473 PAXT-1 37.5 335 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00051270
WBRNAi00107636
WBRNAi00034597
WBRNAi00107635
WBRNAi00004046
WBRNAi00008193
WBRNAi00076594
WBRNAi00107634

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R05D11.6 8596338 8596444 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011034 paxt-1 R05D11.6 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:R05D11.6 8596338 8596444 1
CDS:R05D11.6 8596954 8597071 1
CDS:R05D11.6 8597120 8597217 1
CDS:R05D11.6 8597266 8597353 1
CDS:R05D11.6 8597402 8597532 1
CDS:R05D11.6 8597580 8597785 1
CDS:R05D11.6 8598166 8598425 1

1 Sequence

Length
1008

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R05D11.6.1 R05D11.6.1 1139   I: 8596333-8598551