WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00116644 Genotype  stIs10116 [his-72(promoter)::his-24::mCherry::let-858 3'UTR + unc-119(+)]
Phenotype Remark  embryonic lethal, abnormal cell cycle length, abnormal division angle, abnormal relative cell position; Specific cellular defects are listed in Tables S4 Sheet 1-6 Remark  asd-2 Ahringer clone

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006423 asd-2 T21G5.5 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21G5.5a T21G5.5a 987   I: 6879770-6880041
CDS:T21G5.5b T21G5.5b 1212   I: 6878976-6879204
CDS:T21G5.5c T21G5.5c 1338   I: 6878976-6879204
CDS:T21G5.5d T21G5.5d 1461   I: 6877740-6877801

0 Laboratories

4 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0002402 cell position defective A cell (or group of cells) is not found in the correct body position compared the placement in control animals.
WBPhenotype:0001133 division axis defective The cell division axis is not normal.
WBPhenotype:0001115 cell cycle timing defective early emb Cell cycle timing is abnormal during the first four cell divisions.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00064339

0 Strain