WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00061290 Phenotype Remark  slow growth

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004859 sma-5 W06B3.2 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06B3.2b W06B3.2b 1461   X: 11997961-11998091
CDS:W06B3.2f W06B3.2f 1314   X: 11997961-11998091
CDS:W06B3.2c W06B3.2c 1530   X: 11997961-11998091
CDS:W06B3.2a W06B3.2a 1497   X: 11998022-11998091
CDS:W06B3.2d W06B3.2d 1350   X: 11998022-11998091
CDS:W06B3.2e W06B3.2e 1566   X: 11998022-11998091

1 Laboratories

Primary Identifier
FK

3 Phenotype

Identifier Name Description
WBPhenotype:0000030 growth variant Variations in the processes that regulate the change (increase) in size or mass of an integrated living unit (a cell, tissue, organ or organism) compared to control animals.
WBPhenotype:0000229 small Animals are shorter and thinner than control animals at the same developmental stage.
WBPhenotype:0000103 gut granule development variant Any variation in the progression of the different inclusions within the intestinal cytoplasm, including birefringent crystalline objects and other dark-staining endosomes over time compared to control. In C. elegans these contents might include glycogen granules (polysaccharide storage), rhabditin (carbohydrate storage), yolk granules (lipid and protein), and concentrated waste products (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025246

1 Strain

WormBase ID
WBStrain00000001