WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W06B3.2a Sequence Name  W06B3.2a
Length (nt)  1497   Chromosome Location  X: 11998022-11998091
Chromosome . Primary Identifier  X Chromosome Location . Start  11998022
Chromosome Location . End  11998091
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06B3.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31629 SMA-5, isoform a 56.7 498 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00054867
WBRNAi00113184
WBRNAi00087939
WBRNAi00061290
WBRNAi00112954

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W06B3.2a 11998022 11998091 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004859 sma-5 W06B3.2 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:W06B3.2a 11998022 11998091 -1
CDS:W06B3.2a 11998311 11998407 -1
CDS:W06B3.2a 11998500 11998617 -1
CDS:W06B3.2a 11998752 11998907 -1
CDS:W06B3.2a 11998956 11999420 -1
CDS:W06B3.2a 11999971 12000080 -1
CDS:W06B3.2a 12000241 12000400 -1
CDS:W06B3.2a 12000454 12000632 -1
CDS:W06B3.2a 12001204 12001345 -1

1 Sequence

Length
1497

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W06B3.2a.2 W06B3.2a.2 2618   X: 11997515-12005549
Transcript:W06B3.2a.1 W06B3.2a.1 2033   X: 11997528-12001387