WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00106907 Genotype  Pacdh-1::GFP
Phenotype Remark  RNAi results in decreased expression of the Pacdh-1::GFP transgene Remark  (Table S2) sca-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004736 sca-1 K11D9.2 Caenorhabditis elegans
WBGene00194856 K11D9.5 K11D9.5 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11D9.2c K11D9.2c 2799   III: 10812951-10813253
CDS:K11D9.2a K11D9.2a 3180   III: 10812951-10813253
CDS:K11D9.2b K11D9.2b 3015   III: 10812323-10812354

0 Laboratories

2 Phenotype

Identifier Name Description
WBPhenotype:0001278 transgene expression reduced Any decrease in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00042204

0 Strain