WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00112436 Phenotype Remark  RNAi targeting ncx-2 caused a significant delay in the number of expulsions per DMP cycle when compared with wild-type animals.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003567 ncx-2 C10G8.5 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10G8.5a C10G8.5a 2928   V: 5303693-5303823
CDS:C10G8.5d C10G8.5d 2853   V: 5303693-5303823
CDS:C10G8.5b C10G8.5b 2778   V: 5303693-5303823
CDS:C10G8.5c C10G8.5c 1218   V: 5307701-5307741

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000205 expulsion variant Any variation in the expulsion of gut contents compared to control. In C. elegans, this refers to the final step of the defecation cycle in which the intestinal muscle and anal depressor contractions further pressurize intestinal contents and open the anus to permit expulsion.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00043925

0 Strain