WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C10G8.5d Sequence Name  C10G8.5d
Length (nt)  2853   Chromosome Location  V: 5303693-5303823
Chromosome . Primary Identifier  V Chromosome Location . Start  5303693
Chromosome Location . End  5303823
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10G8.5d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32583 NCX-2, isoform d 105.6 950 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00040324
WBRNAi00040325
WBRNAi00010610
WBRNAi00030216
WBRNAi00024526
WBRNAi00027169
WBRNAi00112437
WBRNAi00112436

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C10G8.5d 5303693 5303823 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003567 ncx-2 C10G8.5 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:C10G8.5d 5303693 5303823 1
CDS:C10G8.5d 5304705 5304981 1
CDS:C10G8.5d 5305464 5305868 1
CDS:C10G8.5d 5305916 5306049 1
CDS:C10G8.5d 5306099 5306210 1
CDS:C10G8.5d 5306528 5306631 1
CDS:C10G8.5d 5306715 5307146 1
CDS:C10G8.5d 5307661 5307741 1
CDS:C10G8.5d 5307786 5307886 1
CDS:C10G8.5d 5308079 5308174 1
CDS:C10G8.5d 5308477 5308635 1
CDS:C10G8.5d 5308802 5308923 1
CDS:C10G8.5d 5308971 5309669 1

1 Sequence

Length
2853

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C10G8.5d.1 C10G8.5d.1 2853   V: 5303693-5309669