WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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RNAi :

WormBase ID  WBRNAi00089689 Phenotype Remark  let-363/CeTOR, pha-4 double RNAi resulted in increased levels of endogenous mRNA for the gene lipl-4
Remark  (Figure S3B) let-363/CeTOR, pha-4 double RNAi. Authors state RNAi clones (aside from let-363/CeTOR) obtained from the Ahringer and Vidal laboratories, Ahringer clone used for curation. If Ahringer clone not available, Vidal clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002583 let-363 B0261.2 Caenorhabditis elegans
WBGene00004013 pha-4 F38A6.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0261.2b B0261.2b 8079   I: 5245781-5245903
CDS:F38A6.1a F38A6.1a 1521   V: 20753052-20753093
CDS:B0261.2a B0261.2a 8088   I: 5245781-5245903
CDS:F38A6.1b F38A6.1b 1329   V: 20755491-20755580
CDS:F38A6.1c F38A6.1c 1236   V: 20756913-20756975

1 Laboratories

Primary Identifier
MAH

1 Phenotype

Identifier Name Description
WBPhenotype:0000136 mRNA levels increased Animals exhibit elevated levels of messenger RNA compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040180

1 Strain

WormBase ID
WBStrain00000001