WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086192 Phenotype Remark  Under fed conditions, nhr-49 RNAi results in reduced levels of mRNA for the genes acs-2, gei-7, fat-5, fat-7, lbp-8, fat-6, acdh-1, acdh-2, and fat-2
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003639 nhr-49 K10C3.6 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10C3.6c K10C3.6c 1506   I: 9869718-9869787
CDS:K10C3.6b K10C3.6b 1431   I: 9871230-9871325
CDS:K10C3.6a K10C3.6a 1434   I: 9871230-9871325
CDS:K10C3.6d K10C3.6d 1461   I: 9869767-9869791
CDS:K10C3.6e K10C3.6e 1065   I: 9872822-9873046

1 Laboratories

Primary Identifier
KRY

1 Phenotype

Identifier Name Description
WBPhenotype:0000137 mRNA levels reduced Animals exhibit decreased levels of messenger RNA compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027365

1 Strain

WormBase ID
WBStrain00004828