WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K10C3.6c Sequence Name  K10C3.6c
Length (nt)  1506   Chromosome Location  I: 9869718-9869787
Chromosome . Primary Identifier  I Chromosome Location . Start  9869718
Chromosome Location . End  9869787
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10C3.6c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32693 NHR-49, isoform c 55.4 501 Caenorhabditis elegans
 

Other

49 RNAi

WormBase ID
WBRNAi00102848
WBRNAi00102849
WBRNAi00034245
WBRNAi00050502
WBRNAi00025936
WBRNAi00025937
WBRNAi00087333
WBRNAi00087335
WBRNAi00087334
WBRNAi00064636
WBRNAi00003976
WBRNAi00025938
WBRNAi00114385
WBRNAi00071048
WBRNAi00087306
WBRNAi00113001
WBRNAi00113231
WBRNAi00114381
WBRNAi00107530
WBRNAi00064840
WBRNAi00064533
WBRNAi00116851
WBRNAi00086179
WBRNAi00086181
WBRNAi00086192
WBRNAi00086193
WBRNAi00102843
WBRNAi00087307
WBRNAi00087886
WBRNAi00110686

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K10C3.6c 9869718 9869787 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003639 nhr-49 K10C3.6 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:K10C3.6c 9869718 9869787 1
CDS:K10C3.6c 9871228 9871325 1
CDS:K10C3.6c 9871912 9872053 1
CDS:K10C3.6c 9872694 9873049 1
CDS:K10C3.6c 9873099 9873662 1
CDS:K10C3.6c 9873711 9873821 1
CDS:K10C3.6c 9873960 9874124 1

1 Sequence

Length
1506

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K10C3.6c.1 K10C3.6c.1 1506   I: 9869718-9874124