WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00103095 Genotype  daf-2(e1370); aak-1(tm1944); aak-2(ok524)
Remark  (Figure 2B) hif-1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. If Ahringer clone not available, Vidal laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001851 hif-1 F38A6.3 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38A6.3a F38A6.3a 2160   V: 20780502-20780521
CDS:F38A6.3b F38A6.3b 2166   V: 20780502-20780521
CDS:F38A6.3e F38A6.3e 2136   V: 20781319-20781505
CDS:F38A6.3c F38A6.3c 1512   V: 20782536-20782568
CDS:F38A6.3d F38A6.3d 1998   V: 20780502-20780521
CDS:F38A6.3f F38A6.3f 2142   V: 20781319-20781505

1 Laboratories

Primary Identifier
MR

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000124 enzyme activity reduced Any variation that results in a decrease in the catalytic activity of an enzyme compared to control. Catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein (can include an RNA component).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041478

0 Strain