WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00065949 Remark  Authors state, dsRNA was synthesized from corresponding cDNA or genomic DNA, genomic dna sequence used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

4 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002078 xpo-1 ZK742.1 Caenorhabditis elegans
WBGene00022813 ZK742.3 ZK742.3 Caenorhabditis elegans
WBGene00022814 ZK742.4 ZK742.4 Caenorhabditis elegans
WBGene00045277 ZK742.6 ZK742.6 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK742.1a ZK742.1a 3243   V: 7805362-7805882
CDS:ZK742.4 ZK742.4 1338   V: 7810273-7810420
CDS:ZK742.1b ZK742.1b 240   V: 7812906-7812913
CDS:ZK742.6 ZK742.6 165   V: 7814633-7814764
CDS:ZK742.3 ZK742.3 1344   V: 7808419-7808572

1 Laboratories

Primary Identifier
TX

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000103 gut granule development variant Any variation in the progression of the different inclusions within the intestinal cytoplasm, including birefringent crystalline objects and other dark-staining endosomes over time compared to control. In C. elegans these contents might include glycogen granules (polysaccharide storage), rhabditin (carbohydrate storage), yolk granules (lipid and protein), and concentrated waste products (Wormatlas).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00006460

1 Strain

WormBase ID
WBStrain00000001