WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK742.1a Sequence Name  ZK742.1a
Length (nt)  3243   Chromosome Location  V: 7805362-7805882
Chromosome . Primary Identifier  V Chromosome Location . Start  7805362
Chromosome Location . End  7805882
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK742.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23467 XPO-1, isoform a 123.8 1080 Caenorhabditis elegans
 

Other

32 RNAi

WormBase ID
WBRNAi00009494
WBRNAi00065947
WBRNAi00061050
WBRNAi00061051
WBRNAi00061053
WBRNAi00061054
WBRNAi00061055
WBRNAi00061059
WBRNAi00061060
WBRNAi00027097
WBRNAi00084648
WBRNAi00094129
WBRNAi00099008
WBRNAi00061052
WBRNAi00061061
WBRNAi00112263
WBRNAi00059695
WBRNAi00087053
WBRNAi00087052
WBRNAi00087054
WBRNAi00084652
WBRNAi00087161
WBRNAi00065949
WBRNAi00087055
WBRNAi00087178
WBRNAi00087056
WBRNAi00065948
WBRNAi00061045
WBRNAi00094506
WBRNAi00098923

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK742.1a 7805362 7805882 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002078 xpo-1 ZK742.1 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK742.1a 7805362 7805882 1
CDS:ZK742.1a 7805934 7807491 1
CDS:ZK742.1a 7807538 7807653 1
CDS:ZK742.1a 7807704 7807974 1
CDS:ZK742.1a 7808123 7808363 1
CDS:ZK742.1a 7812610 7812913 1
CDS:ZK742.1a 7813637 7813868 1

1 Sequence

Length
3243

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK742.1a.1 ZK742.1a.1 4206   V: 7805064-7814584
Transcript:ZK742.1a.2 ZK742.1a.2 4324   V: 7805069-7814656