WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00065073 Remark  mtm-6 RNAi used to bypass the lethality of let-512 to assay the effect mtm-1 had on the endocytosis defect of let-512

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

4 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003475 mtm-1 Y110A7A.5 Caenorhabditis elegans
WBGene00003478 mtm-6 F53A2.8 Caenorhabditis elegans
WBGene00009952 acaa-2 F53A2.7 Caenorhabditis elegans
WBGene00009953 F53A2.9 F53A2.9 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53A2.8c F53A2.8c 2025   III: 13347105-13347134
CDS:F53A2.8b F53A2.8b 2349   III: 13351410-13351757
CDS:F53A2.8a F53A2.8a 2031   III: 13347105-13347134
CDS:Y110A7A.5 Y110A7A.5 1767   I: 5134767-5134806

0 Laboratories

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001421 endocytic transport variant Animals exhibit variations in the directed movement of substances into, out of or mediated by the endosome, a membrane-bound organelle that trafficks material to different compartments of the cell or back to the plasma membrane for recycling compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00006051

0 Strain