WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53A2.8b Sequence Name  F53A2.8b
Length (nt)  2349   Chromosome Location  III: 13351410-13351757
Chromosome . Primary Identifier  III Chromosome Location . Start  13351410
Chromosome Location . End  13351757
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53A2.8b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32050 MTM-6, isoform b 88.3 782 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00065077
WBRNAi00048047
WBRNAi00015453
WBRNAi00006014
WBRNAi00032654
WBRNAi00065087
WBRNAi00065078
WBRNAi00065073
WBRNAi00075948
WBRNAi00091928
WBRNAi00091927

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53A2.8b 13351410 13351757 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003478 mtm-6 F53A2.8 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53A2.8b 13351410 13351757 1
CDS:F53A2.8b 13352068 13352271 1
CDS:F53A2.8b 13352329 13352404 1
CDS:F53A2.8b 13352616 13353562 1
CDS:F53A2.8b 13354093 13354182 1
CDS:F53A2.8b 13354441 13354524 1
CDS:F53A2.8b 13354813 13355337 1
CDS:F53A2.8b 13355386 13355460 1

1 Sequence

Length
2349

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53A2.8b.1 F53A2.8b.1 2590   III: 13351393-13355684