WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00075711 Genotype  him-5(e1490)
Phenotype Remark  Duplication of V6 rays. V6 gives rise to rays 2-6.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004946 sop-3 Y71F9B.10 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9B.10a Y71F9B.10a 4428   I: 2761318-2761513
CDS:Y71F9B.10b Y71F9B.10b 4134   I: 2761318-2761513
CDS:Y71F9B.10c Y71F9B.10c 4446   I: 2761318-2761513
CDS:Y71F9B.10d Y71F9B.10d 3480   I: 2761318-2761513
CDS:Y71F9B.10e Y71F9B.10e 3498   I: 2761318-2761513
CDS:Y71F9B.10g Y71F9B.10g 4152   I: 2761318-2761513

1 Laboratories

Primary Identifier
EM

2 Phenotype

Identifier Name Description
WBPhenotype:0000297 rays fused Any of the finger-like sensory sensilla that project from the tail and embed in the male fan are joined to one another.
WBPhenotype:0002210 extra rays Animals exhibit an extra number of the finger-like sensory sensilla that project from the tail and embed in the male fan.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001693 male posterior alae Males have alae that extend into the tail region. Alae are small linear ridges running along the lateral lines of the cuticle. In C. elegans alae do not extend into the tail region (Wormatlas).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004616

0 Strain