WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077417 Genotype  nre-1 lin-15
Phenotype Remark  loss of a fate marker in the excretory gland cell, scored with lim-6::gfp Remark  exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00045419 lsy-12 R07B5.9 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07B5.9j R07B5.9j 3750   V: 9846598-9847140
CDS:R07B5.9c R07B5.9c 4614   V: 9846598-9847131
CDS:R07B5.9a R07B5.9a 3741   V: 9846598-9847131
CDS:R07B5.9d R07B5.9d 3762   V: 9846598-9847131
CDS:R07B5.9f R07B5.9f 4749   V: 9846598-9847131
CDS:R07B5.9g R07B5.9g 4623   V: 9846598-9847140
CDS:R07B5.9h R07B5.9h 4758   V: 9846598-9847140
CDS:R07B5.9i R07B5.9i 3771   V: 9846598-9847140

1 Laboratories

Primary Identifier
OH

2 Phenotype

Identifier Name Description
WBPhenotype:0000216 cell fate specification variant Any variation in the processes that govern acquisition of particular cell fates compared to control animals.
WBPhenotype:0001660 loss of asymmetry ASE The two morphologically bilaterally symmetric gustatory neurons ASE left (ASEL) and ASE right (ASER) fail to undergo a left/right asymmetric diversification in cell fate.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00032078

0 Strain