WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R07B5.9c Sequence Name  R07B5.9c
Length (nt)  4614   Chromosome Location  V: 9846598-9847131
Chromosome . Primary Identifier  V Chromosome Location . Start  9846598
Chromosome Location . End  9847131
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B5.9c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45237 LSY-12, isoform c 173.0 1537 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00051424
WBRNAi00051425
WBRNAi00053092
WBRNAi00026051
WBRNAi00027433
WBRNAi00001145
WBRNAi00062990
WBRNAi00062991
WBRNAi00017512
WBRNAi00018577
WBRNAi00071557
WBRNAi00077417
WBRNAi00084633
WBRNAi00084637
WBRNAi00117756
WBRNAi00117757

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R07B5.9c 9846598 9847131 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00045419 lsy-12 R07B5.9 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:R07B5.9c 9846598 9847131 -1
CDS:R07B5.9c 9847496 9848233 -1
CDS:R07B5.9c 9848415 9849058 -1
CDS:R07B5.9c 9849645 9849822 -1
CDS:R07B5.9c 9850207 9850380 -1
CDS:R07B5.9c 9850430 9850532 -1
CDS:R07B5.9c 9850726 9850825 -1
CDS:R07B5.9c 9850879 9851276 -1
CDS:R07B5.9c 9851803 9852161 -1
CDS:R07B5.9c 9852310 9852501 -1
CDS:R07B5.9c 9852545 9852730 -1
CDS:R07B5.9c 9853641 9853741 -1
CDS:R07B5.9c 9858476 9858765 -1
CDS:R07B5.9c 9858994 9859424 -1
CDS:R07B5.9c 9859768 9859953 -1

1 Sequence

Length
4614

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R07B5.9c.1 R07B5.9c.1 4624   V: 9846598-9859963