WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00078678 Genotype  hsp-4::gfp
Phenotype Remark  Inactivation of ire-1 function by RNAi blocked both basal and inducible hsp-4::gfp expression in response to tunicamycin. Tunicamycin, in control animals, induces ER stress.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002147 ire-1 C41C4.4 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41C4.4a C41C4.4a 2904   II: 8112670-8112843
CDS:C41C4.4b C41C4.4b 1878   II: 8112670-8112843

1 Laboratories

Primary Identifier
SJ

2 Phenotype

Identifier Name Description
WBPhenotype:0001719 unfolded protein response variant Animals exhibit variations in any of the series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) and or the mitochondria, compared to control. One such response is the increase in expression of chaperones.
WBPhenotype:0000359 tunicamycin response variant Animals exhibit variations in the response to the addition of tunicamycin compared to that observed in control animals. Tunicamycin induces the unfolded protein response.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005036

0 Strain