WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110544 Genotype  Pgcy-5::mpk-1(RNAi); DAF-2c::Venus
Phenotype Remark  RNAi of mpk-1 reduced worm attraction to the salt concentration associated with food. Remark  For ASER-specific RNAi knockdown, sense and antisense fragments of the target sequence were fused to the gcy-5 promoter. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003401 mpk-1 F43C1.2 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43C1.2a F43C1.2a 1131   III: 4217396-4217615
CDS:F43C1.2b F43C1.2b 1335   III: 4217396-4217615

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001780 associative learning variant Variations in the behavioral plasticity induced by the integration of two sensory signals compared to control. In C. elegans animals exhibit enhancement of butanone chemotaxis by preexposure to butanone and food.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00045517

0 Strain