WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00087181 Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. If Ahringer clone not available, Vidal laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002189 kin-1 ZK909.2 Caenorhabditis elegans

14 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK909.2n ZK909.2n 1740   I: 14913780-14913989
CDS:ZK909.2j ZK909.2j 1194   I: 14919535-14919670
CDS:ZK909.2h ZK909.2h 1146   I: 14919535-14919670
CDS:ZK909.2i ZK909.2i 1080   I: 14922977-14922998
CDS:ZK909.2b ZK909.2b 1128   I: 14933904-14933973
CDS:ZK909.2e ZK909.2e 1215   I: 14936990-14937146
CDS:ZK909.2d ZK909.2d 1098   I: 14940345-14940384
CDS:ZK909.2c ZK909.2c 1647   I: 14946155-14946958
CDS:ZK909.2a ZK909.2a 1080   I: 14933904-14933973
CDS:ZK909.2f ZK909.2f 1113   I: 14934833-14934935
CDS:ZK909.2g ZK909.2g 1032   I: 14922977-14922998
CDS:ZK909.2k ZK909.2k 1161   I: 14934833-14934935
CDS:ZK909.2l ZK909.2l 1167   I: 14936990-14937146
CDS:ZK909.2m ZK909.2m 1050   I: 14940345-14940384

1 Laboratories

Primary Identifier
GR

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001779 miRNA expression variant Variations in the biogenesis or stability of the microRNA class of molecules compared to control. In C. elegans these molecules are endogenous single-stranded regulatory molecules, 19-25 nucleotides long, with the potential to arise from hairpin, foldback, structures from their primary transcripts.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031224

0 Strain