WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Phenotype : WBPhenotype:0001779 miRNA expression variant

Description  Variations in the biogenesis or stability of the microRNA class of molecules compared to control. In C. elegans these molecules are endogenous single-stranded regulatory molecules, 19-25 nucleotides long, with the potential to arise from hairpin, foldback, structures from their primary transcripts.

45 RNAi

WormBase ID
WBRNAi00084848
WBRNAi00086053
WBRNAi00086052
WBRNAi00086054
WBRNAi00087770
WBRNAi00087772
WBRNAi00093854
WBRNAi00093824
WBRNAi00093821
WBRNAi00093822
WBRNAi00093720
WBRNAi00093722
WBRNAi00093718
WBRNAi00084650
WBRNAi00084855
WBRNAi00087146
WBRNAi00085190
WBRNAi00084845
WBRNAi00084844
WBRNAi00084847
WBRNAi00084846
WBRNAi00084849
WBRNAi00084851
WBRNAi00084850
WBRNAi00084853
WBRNAi00085189
WBRNAi00085191
WBRNAi00087771
WBRNAi00086055
WBRNAi00086057

75 RNAi Not Observed

WormBase ID
WBRNAi00087196
WBRNAi00087222
WBRNAi00084648
WBRNAi00087154
WBRNAi00087791
WBRNAi00087152
WBRNAi00087177
WBRNAi00087212
WBRNAi00093721
WBRNAi00084649
WBRNAi00087217
WBRNAi00087179
WBRNAi00087206
WBRNAi00087210
WBRNAi00087784
WBRNAi00087219
WBRNAi00087204
WBRNAi00087150
WBRNAi00087151
WBRNAi00087153
WBRNAi00087181
WBRNAi00087182
WBRNAi00087183
WBRNAi00087184
WBRNAi00087185
WBRNAi00087186
WBRNAi00087187
WBRNAi00087188
WBRNAi00087189
WBRNAi00087190

1 Children

Identifier Name Description
WBPhenotype:0002528 miRNA biogenesis defective Animals (or cells) exhibit defects in the ability to produce mature microRNAs (miRNAs) from a miRNA locus. The defects could be at the level of miRNA transcription, pri-miRNA processing, and/or pre-miRNA processing.

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Parents

Identifier Name Description
WBPhenotype:0000113 RNA expression variant Variations in the biogenesis and stability of any class of RNA molecules (rRNAs, miRNAs, tRNAs etc) compared to control.

17 Phenotype Allele

Public Name
rh61
ok304
q20
ok247
ma192
ma202
e1111
gk448
n179
ma422ma423
ma403
ma406
n2853
ok1136
bn2
tm3024
bc374

19 Phenotype Allele Not Observed

Public Name
tm872
b245
hc17
mg366
mg375
pk1426
ne337
ne219
tm1094
ok1328
n4358
pk2298
n4357
n4503
gg106
gg98
mg408
ne3361
bc375

1 Synonyms

Name Type
miRNA expression abnormal