WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110492 Genotype  eri-1(mg366); GFP-CUP-5
Phenotype Remark  Size increase of lysosomal structures. Remark  Exact sequence used for RNAi not stated by authors, Vidal laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

5 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017269 eco-1 F08F8.4 Caenorhabditis elegans
WBGene00017272 F08F8.7 F08F8.7 Caenorhabditis elegans
WBGene00017273 gos-28 F08F8.8 Caenorhabditis elegans
WBGene00017274 F08F8.9 F08F8.9 Caenorhabditis elegans
WBGene00017275 F08F8.10 F08F8.10 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08F8.8 F08F8.8 705   III: 7347601-7347725
CDS:F08F8.9b F08F8.9b 1875   III: 7349408-7349496
CDS:F08F8.9c F08F8.9c 1554   III: 7349906-7349939
CDS:F08F8.10b F08F8.10b 1563   III: 7354256-7354335
CDS:F08F8.4 F08F8.4 945   III: 7357833-7357884
CDS:F08F8.7 F08F8.7 684   III: 7345959-7346156
CDS:F08F8.9a F08F8.9a 1881   III: 7349408-7349502
CDS:F08F8.10a F08F8.10a 1572   III: 7354256-7354335

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002097 lysosome morphology variant Any variation in the form or composition of membrane bound organelles, known as lysosomes, that have an acidic interior and generally act to digest components of the cell, compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038455

0 Strain