WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00065151 Genotype  hsp-4::GFP
Phenotype Remark  ER calcium homeostasis defect Remark  ER calcium homeostasis as judged in intestinal cells by quantifying the unfolded protein response(UPR) using hsp-4::GFP induction as a read-out. Disruption of ER calcium homeostasis triggers the UPR

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004736 sca-1 K11D9.2 Caenorhabditis elegans
WBGene00194856 K11D9.5 K11D9.5 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11D9.2c K11D9.2c 2799   III: 10812951-10813253
CDS:K11D9.2a K11D9.2a 3180   III: 10812951-10813253
CDS:K11D9.2b K11D9.2b 3015   III: 10812323-10812354

1 Laboratories

Primary Identifier
VP

1 Phenotype

Identifier Name Description
WBPhenotype:0001352 endoplasmic reticulum metabolism variant Variations in the chemical reactions and pathways of the endoplasmic reticulum compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028479

0 Strain