WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077671 Genotype  rrf-3(pk1426)
Phenotype Remark  In embryos that display midline bulges near the end of enclosure, authors found loss of accumulation of midline junctional actin. Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013683 zoo-1 Y105E8A.26 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8A.26b Y105E8A.26b 3375   I: 14529532-14529627
CDS:Y105E8A.26d Y105E8A.26d 3120   I: 14536999-14537001
CDS:Y105E8A.26a Y105E8A.26a 3492   I: 14529532-14529627
CDS:Y105E8A.26c Y105E8A.26c 3396   I: 14531977-14532030

1 Laboratories

Primary Identifier
SU

2 Phenotype

Identifier Name Description
WBPhenotype:0001587 actin organization biogenesis phenotype Animals exhibit variations in the formation and/or arrangement of actin, an abundant cytoskeletal protein in most cells, often linked to the plasma membrane and concentrated at cell junctions compared to control (Wormatlas).
WBPhenotype:0001136 embryonic morphology variant Animals exhibit variations in the form, structure or composition of any of its parts during any developmental stage ranging from zygote formation to hatching compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00032115

0 Strain