WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y105E8A.26b Sequence Name  Y105E8A.26b
Length (nt)  3375   Chromosome Location  I: 14529532-14529627
Chromosome . Primary Identifier  I Chromosome Location . Start  14529532
Chromosome Location . End  14529627
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.26b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53794 ZOO-1, isoform b 124.2 1124 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00077672
WBRNAi00077667
WBRNAi00077673
WBRNAi00077668
WBRNAi00077670
WBRNAi00077669
WBRNAi00077671

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y105E8A.26b 14529532 14529627 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013683 zoo-1 Y105E8A.26 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y105E8A.26b 14529532 14529627 1
CDS:Y105E8A.26b 14531977 14532030 1
CDS:Y105E8A.26b 14535952 14536076 1
CDS:Y105E8A.26b 14536902 14537001 1
CDS:Y105E8A.26b 14537059 14537468 1
CDS:Y105E8A.26b 14537735 14537939 1
CDS:Y105E8A.26b 14539193 14540148 1
CDS:Y105E8A.26b 14541264 14541807 1
CDS:Y105E8A.26b 14543340 14543406 1
CDS:Y105E8A.26b 14543456 14543792 1
CDS:Y105E8A.26b 14544621 14544907 1
CDS:Y105E8A.26b 14546441 14546634 1

1 Sequence

Length
3375

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y105E8A.26b.1 Y105E8A.26b.1 3613   I: 14529529-14546869