WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098834 Genotype  nhr-25(RNAi)
Phenotype Remark  pop-1 RNAi results in missing distal tip cells (although this phenotype was partially suppressed by nhr-25 RNAi) and partially suppresses the extra distal tip cell phenotype of nhr-25(RNAi) Remark  (Table S3) pop-1 RNAi. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004077 pop-1 W10C8.2 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10C8.2 W10C8.2 1317   I: 2823468-2823937

1 Laboratories

Primary Identifier
HL

2 Phenotype

Identifier Name Description
WBPhenotype:0001962 missing distal tip cells Animals produce less distal tip cells compared to controls.
WBPhenotype:0001656 distal tip cell development variant Any variation in the progression of the leader cell that guides and shapes the outgrowth of the gonad while crawling along the body wall to force the germline to extend into a long tubular shape over time from its formation to its mature structure compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028371

0 Strain