WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W10C8.2 Sequence Name  W10C8.2
Length (nt)  1317   Chromosome Location  I: 2823468-2823937
Chromosome . Primary Identifier  I Chromosome Location . Start  2823468
Chromosome Location . End  2823937
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W10C8.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46967 POP-1 48.6 438 Caenorhabditis elegans
 

Other

249 RNAi

WormBase ID
WBRNAi00114301
WBRNAi00114066
WBRNAi00114145
WBRNAi00114224
WBRNAi00080200
WBRNAi00082747
WBRNAi00082746
WBRNAi00083471
WBRNAi00083472
WBRNAi00083474
WBRNAi00082769
WBRNAi00091581
WBRNAi00091583
WBRNAi00099006
WBRNAi00091582
WBRNAi00099007
WBRNAi00092552
WBRNAi00092554
WBRNAi00092553
WBRNAi00092556
WBRNAi00091564
WBRNAi00091596
WBRNAi00080201
WBRNAi00091571
WBRNAi00098998
WBRNAi00061054
WBRNAi00098859
WBRNAi00098999
WBRNAi00101457
WBRNAi00106565

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W10C8.2 2823468 2823937 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004077 pop-1 W10C8.2 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:W10C8.2 2823468 2823937 -1
CDS:W10C8.2 2824877 2825429 -1
CDS:W10C8.2 2828480 2828598 -1
CDS:W10C8.2 2830119 2830293 -1

1 Sequence

Length
1317

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W10C8.2.1 W10C8.2.1 2560   I: 2822243-2830311