WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00079301 Phenotype Remark  Pattern of phosphorylation of RNA Pol II CTD Ser 5 altered in embryo; 2 distinct foci of Phospho-Ser5 appeaer in nuclei as opposed to a more diffuse pattern in wild type
Remark  Probe only listed as yk326f12 in paper, using yk326f12.3 for curation; taf-5 in paper has since been renamed taf-4
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006385 taf-4 R119.6 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R119.6 R119.6 1572   I: 382833-382913

1 Laboratories

Primary Identifier
LD

1 Phenotype

Identifier Name Description
WBPhenotype:0001349 protein phosphorylation variant Variations in the processes that incorporate phosphate groups to one or more amino acids within a protein, compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004890

0 Strain