WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R119.6 Sequence Name  R119.6
Length (nt)  1572   Chromosome Location  I: 382833-382913
Chromosome . Primary Identifier  I Chromosome Location . Start  382833
Chromosome Location . End  382913
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R119.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39613 TAF-4 57.7 523 Caenorhabditis elegans
 

Other

40 RNAi

WormBase ID
WBRNAi00051754
WBRNAi00026088
WBRNAi00112704
WBRNAi00004075
WBRNAi00079274
WBRNAi00112705
WBRNAi00113232
WBRNAi00113243
WBRNAi00116751
WBRNAi00113164
WBRNAi00113165
WBRNAi00113119
WBRNAi00113121
WBRNAi00113013
WBRNAi00113002
WBRNAi00026089
WBRNAi00106658
WBRNAi00112703
WBRNAi00079294
WBRNAi00079279
WBRNAi00112706
WBRNAi00112707
WBRNAi00112708
WBRNAi00112702
WBRNAi00079284
WBRNAi00079289
WBRNAi00079301
WBRNAi00079300
WBRNAi00079307
WBRNAi00079312

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R119.6 382833 382913 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006385 taf-4 R119.6 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:R119.6 382833 382913 1
CDS:R119.6 382989 383064 1
CDS:R119.6 383121 383374 1
CDS:R119.6 383429 383564 1
CDS:R119.6 384625 385225 1
CDS:R119.6 386076 386336 1
CDS:R119.6 388046 388150 1
CDS:R119.6 388377 388434 1

1 Sequence

Length
1572

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R119.6.1 R119.6.1 1709   I: 382826-388564