WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086873 Remark  paper remark: Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Authors used cDNA yk26d7 or yk100e3..
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002163 ist-1 C54D1.3 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54D1.3e C54D1.3e 3567   X: 7126651-7126865
CDS:C54D1.3c C54D1.3c 3012   X: 7132207-7132336
CDS:C54D1.3b C54D1.3b 3282   X: 7126651-7126865
CDS:C54D1.3d C54D1.3d 3297   X: 7132207-7132336

1 Laboratories

Primary Identifier
GR

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001539 dauer induction variant Animals exhibit variations in the entry into the dauer stage when exposed to conditions that induce dauer formation in control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005614

1 Strain

WormBase ID
WBStrain00000001